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Standard BioTools Reports Third Quarter 2025 Financial Results

SOUTH SAN FRANCISCO, Calif., Nov. 04, 2025 (GLOBE NEWSWIRE) -- Standard BioTools Inc. (NASDAQ: LAB) (the “Company” or “Standard BioTools”) today announced financial results for the quarter ended September 30, 2025.

Recent Highlights:

  • Third quarter 2025 total combined company revenue of $46.2 million; Revenue from continuing operations of $19.6 million
  • Implemented restructuring plan expected to deliver over $40 million in annualized cost savings; On track to achieve positive adjusted EBITDA target in 2026
  • $217.0 million in cash & cash equivalents as of September 30, 2025; Approximately $550 million in cash & cash equivalents expected at close of transaction with Illumina in first half of 2026 to fuel inorganic growth strategy

“The third quarter marked another period of solid execution as we sharpen our focus and position Standard BioTools for the next stage,” said Michael Egholm, PhD, President and Chief Executive Officer of Standard BioTools. “Our commercial team delivered consistent overall performance amid a still-evolving macro environment, and with cost savings initiatives beginning to take hold, we are simplifying operations, increasing productivity and driving the go-forward business toward profitability expected in 2026. Combined with a strong balance sheet at quarter end and the significant cash injection expected from the pending Illumina transaction, we are well positioned to expand our portfolio through strategic M&A that we believe will fuel growth and deliver long-term value for our shareholders.”

Operational Restructuring

In September, as previously disclosed in the Company’s SEC filings, the Company implemented a phased operational restructuring plan expected to deliver over $40 million in total annualized cost savings, to be fully realized in 2026. The plan included an aggregate reduction-in-force of approximately 20% of its global workforce as well as initiatives designed to increase operating efficiency, reduce costs, and align resources with the Company’s long-term strategic objectives. These actions reinforce the Company’s path to generating positive adjusted EBITDA expected in 2026.

“Given the current operating environment, these decisions were important to keep our organization lean, focused and positioned to emerge stronger tomorrow than we are today,” said Alex Kim, Chief Financial Officer of Standard BioTools. “I want to sincerely thank our departing colleagues for their contributions as we take these steps to secure the long-term success of Standard BioTools – delivering innovative solutions to our customers as they advance science and improve human health.”

The cost savings initiative, together with the continued application of the Standard BioTools Business System (SBS), is expected to generate efficiencies across sales and marketing, research and development, and general and administrative functions. As previously announced, Standard BioTools will consolidate its South San Francisco operations into its Singapore facility, co-locating research and development with manufacturing. As part of this transition, the Company also plans to establish its global headquarters in Boston.

Financial Results Table: Continuing Operations

  Three Months Ended
September 30,
    Nine Months Ended
September 30,
 
(Unaudited, in millions, except percentages) 2025     2024     2025     2024  
Revenue $ 19.6     $ 22.1     $ 61.5     $ 66.2  
Gross margin   48.5 %     54.9 %     50.6 %     50.6 %
Non-GAAP gross margin   53.5 %     57.3 %     54.9 %     55.2 %
Operating expenses $ 42.4     $ 38.8     $ 116.8     $ 134.9  
Non-GAAP operating expenses $ 27.0     $ 26.3     $ 80.5     $ 84.5  
Operating loss $ (32.9 )   $ (26.7 )   $ (85.6 )   $ (101.4 )
Net loss from continuing operations $ (31.7 )   $ (21.9 )   $ (72.7 )   $ (63.8 )
Adjusted EBITDA $ (16.5 )   $ (13.7 )   $ (46.8 )   $ (48.0 )
Cash, cash equivalents, restricted cash, short-term and long-term investments $ 217.0     $ 338.1     $ 217.0     $ 338.1  


Third Quarter 2025 Financial Results: Continuing Operations

Following the announced sale of SomaLogic, Inc. (“SomaLogic”) and other specified assets to Illumina, Inc. (“Illumina”) in June 2025, all financial results in this section reflect continuing operations only.

  • Revenue was $19.6 million in the third quarter of 2025, down 11% year-over-year.
    • Consumables revenue was $8.7 million in the third quarter of 2025, down 17% year-over-year. Lower consumables revenue in the quarter reflected project funding declines in flow and microfluidics, partially offset by growth in imaging.
    • Instruments revenue was $5.1 million in the third quarter of 2025, down 3% year-over-year. Instrument revenue in the quarter reflected growth in imaging but overall remained impacted by capital-constrained end-markets globally.
    • Services revenue, which is predominantly Field Services, was $5.8 million in the third quarter of 2025, down 9% year-over-year. Field Services revenue decreased due to fewer active service contracts and lower on-demand revenue driven by improved instrument quality and uptime.
  • Gross margins in the third quarter of 2025 were approximately 48.5%, versus 54.9% in the third quarter of 2024; and non-GAAP gross margins in the third quarter of 2025 were approximately 53.5%, versus 57.3% in the third quarter of 2024. Gross margins and non-GAAP gross margins were driven by volume and product mix.

  • Operating expenses in the third quarter of 2025 were $42.4 million, an increase of $3.6 million, or up 9%, compared to the third quarter of 2024. Operating expenses included $9.4 million in restructuring and related charges. Non-GAAP operating expenses, which exclude transaction costs, stock-based compensation, and restructuring charges, were $27.0 million in the third quarter of 2025, an increase of $0.7 million, or up 3%, compared to the third quarter of 2024. The increase in operating expenses is due to the reclassification of SomaLogic as discontinued operations and the retention of shared corporate costs within continuing operations, more than offsetting lower R&D expenses and continued productivity gains from SBS.

  • Net loss for the third quarter of 2025 was $31.7 million, compared to a net loss of $21.9 million in the third quarter of 2024, representing an increase of $9.8 million or 45%, while adjusted EBITDA for the third quarter of 2025 was a loss of $16.5 million, versus an adjusted EBITDA loss of $13.7 million in the third quarter of 2024, an increase of $2.9 million, or 21%.

Full Year 2025 Revenue Outlook

For fiscal year 2025, the Company continues to expect combined revenue in the range of $165 million to $175 million. Revenue from continuing operations is expected to be in the range of $78 million to $83 million.

Use of Non-GAAP Financial Information

Standard BioTools has presented certain financial information in accordance with U.S. GAAP and on a non-GAAP basis. The non-GAAP financial measures included in this press release are non-GAAP gross margin, non-GAAP gross profit, non-GAAP operating expenses, and adjusted EBITDA. Management uses these non-GAAP financial measures, in addition to GAAP financial measures, as a measure of operating performance because the non-GAAP financial measures do not include the impact of items that management does not consider indicative of the Company’s core operating performance. Management believes that non-GAAP financial measures, taken in conjunction with GAAP financial measures, provide useful information for both management and investors by excluding certain non-cash and other expenses that are not indicative of the Company’s core operating results. Management uses non-GAAP measures to compare the Company’s performance relative to forecasts and strategic plans and to benchmark the Company’s performance externally against competitors. Non-GAAP information is not prepared under a comprehensive set of accounting rules and should only be used to supplement an understanding of the Company’s operating results as reported under U.S. GAAP. Standard BioTools encourages investors to carefully consider its results under GAAP, as well as its supplemental non-GAAP information and the reconciliations between these presentations, to more fully understand its business. Reconciliations between GAAP and non-GAAP operating results are presented in the accompanying tables of this release.

Forward-Looking Statements

This press release contains forward-looking statements within the meaning of the Private Securities Litigation Reform Act of 1995, including, among others, statements regarding future financial and business performance, including with respect to future revenue and expected cash at the closing of the transaction with Illumina; operational and strategic plans, including potential cost savings from the operational restructuring plan and the timing for realizing such cost savings; deployment of capital; market and growth opportunity and potential; and the potential to realize the expected benefits and synergies of prior and potential future acquisitions, including the potential for such transactions to drive long-term profitable growth. Forward-looking statements are subject to numerous risks and uncertainties that could cause actual results to differ materially from currently anticipated results, including, but not limited to, risks that the anticipated benefits and synergies of announced divestures and prior and potential future acquisitions and the integration of any such businesses, including the potential for such transactions to drive long-term profitable growth, may not be fully realized or may take longer to realize than expected; risks that the Company may not realize expected cost savings from such transactions; possible integration, restructuring and transition-related disruption resulting from such transactions, including through the loss of customers, suppliers, and employees and adverse impacts on the Company’s development activities and results of operation; the timing of the closing of the transaction with Illumina and the operating expenses over the intervening period; integration and restructuring activities, including customer and employee relations, management distraction, and reduced operating performance; risks that internal and external costs required for ongoing and planned activities may be higher than expected, which may cause the Company to use cash more quickly than it expects or change or curtail some of the Company’s plans, or both; risks that the Company’s expectations as to expenses, cash usage, and cash needs may prove not to be correct for other reasons such as changes in plans or actual events being different than our assumptions; changes in the Company’s business or external market conditions; anticipated NIH funding pressures; the expected effect from U.S. export controls and the expected impact from tariffs; challenges inherent in developing, manufacturing, launching, marketing, and selling new products; interruptions or delays in the supply of components or materials for, or manufacturing of, the Company’s products; reliance on sales of capital equipment for a significant proportion of revenues in each quarter; seasonal variations in customer operations; unanticipated increases in costs or expenses; continued or sustained budgetary, inflationary, or recessionary pressures; uncertainties in contractual relationships; reductions in research and development spending or changes in budget priorities by customers; uncertainties relating to the Company’s research and development activities, and distribution plans and capabilities; potential product performance and quality issues; risks associated with international operations; intellectual property risks; and competition. For information regarding other related risks, see the “Risk Factors” section of the Company’s annual report on Form 10-K, for the year ended December 31, 2024, filed with the SEC on March 11, 2025, the Company’s quarterly report on Form 10-Q for the quarter ended June 30, 2025, filed with the SEC on August 15, 2025, and in the Company’s other filings with the SEC. These forward-looking statements speak only as of the date hereof. The Company disclaims any obligation to update these forward-looking statements except as may be required by law.

About Standard BioTools Inc.

Standard BioTools Inc. (Nasdaq: LAB), has an established portfolio of essential, standardized next-generation technologies that help biomedical researchers develop better medicines faster. As a leading solutions provider, the company provides reliable and repeatable insights in health and disease using its proprietary SomaScan, mass cytometry and microfluidics technologies, which help transform scientific discoveries into better patient outcomes. Standard BioTools works with leading academic, government, pharmaceutical, biotechnology, plant and animal research and clinical laboratories worldwide, focusing on the most pressing needs in translational and clinical research, including oncology, immunology and immunotherapy. Learn more at standardbio.com or connect with us on X, Facebook®, LinkedIn, and YouTube™.

For Research Use Only. Not for use in diagnostic procedures.

Limited Use Label License and other terms may apply: standardbio.com/legal/salesterms.
Patent and License Information: standardbio.com/legal/notices.
Trademarks: standardbio.com/legal/trademarks. Any other trademarks are the sole property of their respective owners. ©2025 Standard BioTools Inc. (f.k.a. Fluidigm Corporation). All rights reserved.

Investor Contact:
ir@standardbio.com

STANDARD BIOTOOLS INC.
CONDENSED CONSOLIDATED STATEMENTS OF OPERATIONS
Continuing Operations
(In thousands, except per share amounts)
(Unaudited)
    Three Months Ended
September 30,
    Nine Months Ended
September 30,
 
    2025     2024     2025     2024  
Revenue:                        
Product revenue   $ 13,800     $ 15,779     $ 44,254     $ 46,987  
Services and other revenue     5,752       6,307       17,282       19,244  
Total revenue     19,552       22,086       61,536       66,231  
Cost of revenue:                        
Cost of product revenue     6,728       6,159       20,767       21,775  
Cost of services and other revenue     3,340       3,801       9,608       10,930  
Total cost of revenue     10,068       9,960       30,375       32,705  
Gross profit     9,484       12,126       31,161       33,526  
Operating expenses:                        
Research and development     6,356       6,939       18,018       21,791  
Selling, general and administrative     26,595       24,466       84,524       75,740  
Restructuring and related charges     9,428       2,341       12,707       12,374  
Transaction and integration expenses     43       5,079       1,517       25,024  
Total operating expenses     42,422       38,825       116,766       134,929  
Loss from continuing operations     (32,938 )     (26,699 )     (85,605 )     (101,403 )
Bargain purchase gain                       25,213  
Interest income     2,140       4,794       7,517       16,303  
Interest expense     (10 )     (853 )     (21 )     (2,744 )
Other income (expense), net     (2,092 )     957       3,438       (865 )
Loss from continuing operations before income taxes     (32,900 )     (21,801 )     (74,671 )     (63,496 )
Income tax benefit (expense)     1,216       (118 )     1,944       (270 )
Net loss from continuing operations     (31,684 )     (21,919 )     (72,727 )     (63,766 )
Discontinued operations:                        
Loss from discontinued operations, net of tax     (3,003 )     (5,019 )     (21,452 )     (41,047 )
Net loss     (34,687 )     (26,938 )     (94,179 )     (104,813 )
Induced conversion of redeemable preferred stock                       (46,014 )
Net loss attributable to common stockholders   $ (34,687 )   $ (26,938 )   $ (94,179 )   $ (150,827 )
Net loss per share from continuing operations, basic and diluted   $ (0.08 )   $ (0.06 )   $ (0.19 )   $ (0.32 )
Net loss per share from discontinued operations, basic and diluted   $ (0.01 )   $ (0.01 )   $ (0.06 )   $ (0.12 )
Net loss per share attributable to common stockholders, basic and diluted   $ (0.09 )   $ (0.07 )   $ (0.25 )   $ (0.44 )
Shares used in computing net loss per share attributable to common stockholders, basic and diluted     382,630       371,538       380,468       346,093  


STANDARD BIOTOOLS INC.
CONDENSED CONSOLIDATED BALANCE SHEETS
Continuing Operations
(In thousands)
(Unaudited)
             
    September 30,     December 31,  
    2025     2024  
ASSETS            
Current assets:            
Cash and cash equivalents   $ 129,418     $ 166,728  
Short-term investments     65,485       126,146  
Accounts receivable, net     13,536       14,741  
Inventory     25,418       20,744  
Prepaid expenses and other current assets     7,906       4,561  
Current assets held for sale     230,676       42,963  
Total current assets     472,439       375,883  
Property and equipment, net     20,738       22,775  
Operating lease right-of-use asset, net     23,453       26,567  
Other non-current assets     3,521       3,688  
Long-term investments     19,485        
Non-current assets held for sale           183,432  
Total assets   $ 539,636     $ 612,345  
             
LIABILITIES AND STOCKHOLDERS’ EQUITY            
Current liabilities:            
Accounts payable   $ 6,619     $ 5,049  
Accrued liabilities     30,810       21,435  
Operating lease liabilities, current     5,113       4,806  
Deferred revenue, current     40,111       10,274  
Deferred grant income, current     3,098       3,527  
Current liabilities held for sale     22,214       20,804  
Total current liabilities     107,965       65,895  
Convertible notes, non-current     299       299  
Deferred tax liability     1,139       1,081  
Operating lease liabilities, non-current     21,977       25,590  
Deferred revenue, non-current     2,366       32,674  
Deferred grant income, non-current     5,031       7,243  
Other non-current liabilities     1,200       1,062  
Non-current liabilities held for sale           6,779  
Total liabilities     139,977       140,623  
Total stockholders’ equity     399,659       471,722  
Total liabilities and stockholders’ equity   $ 539,636     $ 612,345  


STANDARD BIOTOOLS INC.
CONDENSED CONSOLIDATED STATEMENTS OF CASH FLOWS
(In thousands)
(Unaudited)
 
       
    Nine Months Ended September 30,  
    2025     2024  
Operating activities            
Net loss   $ (94,179 )   $ (104,813 )
Bargain purchase gain           (25,213 )
Stock-based compensation expense     23,870       24,262  
Amortization of acquired intangible assets     1,715       3,533  
Depreciation and amortization     7,971       9,375  
Accretion of discount on short-term investments, net     (2,182 )     (6,303 )
Non-cash lease expense     4,435       4,348  
Provision for excess and obsolete inventory     1,975       1,991  
Change in fair value of warrants     (232 )     (474 )
Change in fair value of contingent consideration     (3,400 )      
Other non-cash items     922       1,111  
Changes in assets and liabilities, net     (14,048 )     (37,212 )
Net cash used in operating activities     (73,153 )     (129,395 )
             
Investing activities            
Cash and restricted cash acquired in merger           280,033  
Purchases of short-term investments     (91,241 )     (226,612 )
Purchases of long-term investments     (19,483 )      
Proceeds from sales and maturities of investments     154,000       289,000  
Purchases of property and equipment     (7,827 )     (4,973 )
Net cash provided by investing activities     35,449       337,448  
             
Financing activities            
Repayment of term loan and convertible notes           (8,192 )
Payment of term loan fee           (545 )
Repurchase of common stock           (40,490 )
Proceeds from ESPP stock issuance     308       425  
Payments for taxes related to net share settlement of equity awards and other     (358 )     (414 )
Proceeds from exercise of stock options           1,120  
Net cash provided by (used in) financing activities     (50 )     (48,096 )
Effect of foreign exchange rate fluctuations on cash and cash equivalents     942       (518 )
Net (decrease) increase in cash, cash equivalents and restricted cash     (36,812 )     159,439  
Cash, cash equivalents and restricted cash at beginning of period     168,818       52,499  
Cash, cash equivalents and restricted cash at end of period   $ 132,006     $ 211,938  
             
Cash, cash equivalents, and restricted cash consists of:            
Cash and cash equivalents   $ 129,418     $ 210,647  
Restricted cash     2,588       1,291  
Total cash, cash equivalents and restricted cash   $ 132,006     $ 211,938  


STANDARD BIOTOOLS INC.
REVENUE
Continuing Operations
(In thousands)
(Unaudited)
           
    Three Months Ended
September 30,
  Nine Months Ended
September 30,
 
    2025   2024   2025   2024  
Product revenue:                  
Instruments   $ 5,095   $ 5,271   $ 16,956   $ 17,221  
Consumables     8,705     10,508     27,298     29,766  
Total product revenue     13,800     15,779     44,254     46,987  
Services and other revenue     5,752     6,307     17,282     19,244  
Total revenue   $ 19,552   $ 22,086   $ 61,536   $ 66,231  


STANDARD BIOTOOLS INC.
RECONCILIATION OF GAAP TO NON-GAAP FINANCIAL INFORMATION
Continuing Operations
(In thousands)
(Unaudited)

ITEMIZED RECONCILIATION OF GROSS PROFIT TO NON-GAAP GROSS PROFIT AND MARGIN PERCENTAGE
             
    Three Months Ended
September 30,
    Nine Months Ended
September 30,
 
    2025     2024     2025     2024  
Gross profit   $ 9,484     $ 12,126     $ 31,161     $ 33,526  
Amortization of acquired intangible assets                       1,407  
Depreciation and amortization     590       318       1,407       1,017  
Stock-based compensation expense     386       218       1,030       601  
Loss on disposal of property and equipment                 187        
Cost of sales adjustment                        
Non-GAAP gross profit   $ 10,460     $ 12,662     $ 33,785     $ 36,551  
                         
Gross margin percentage     48.5 %     54.9 %     50.6 %     50.6 %
Amortization of acquired intangible assets                       2.2 %
Depreciation and amortization     3.0 %     1.4 %     2.3 %     1.5 %
Stock-based compensation expense     2.0 %     1.0 %     1.7 %     0.9 %
Loss on disposal of property and equipment                 0.3 %      
Cost of sales adjustment                        
Non-GAAP gross margin percentage     53.5 %     57.3 %     54.9 %     55.2 %


STANDARD BIOTOOLS INC.
RECONCILIATION OF GAAP TO NON-GAAP FINANCIAL INFORMATION
Continuing Operations
(In thousands)
(Unaudited)

ITEMIZED RECONCILIATION OF GAAP TO NON-GAAP OPERATING EXPENSES
             
    Three Months Ended
September 30,
    Nine Months Ended
September 30,
 
    2025     2024     2025     2024  
Operating expenses   $ 42,422     $ 38,825     $ 116,766     $ 134,929  
Restructuring and related charges     (9,428 )     (2,341 )     (12,707 )     (12,374 )
Transaction and integration expenses     (43 )     (5,079 )     (1,517 )     (25,024 )
Stock-based compensation expense     (4,938 )     (4,431 )     (17,715 )     (11,026 )
Amortization of acquired intangible assets                        
Depreciation and amortization     (1,009 )     (650 )     (4,286 )     (1,945 )
Loss on disposal of property and equipment           (4 )           (27 )
Non-GAAP operating expenses   $ 27,004     $ 26,320     $ 80,541     $ 84,533  
                         
R&D operating expenses   $ 6,356     $ 6,939     $ 18,018     $ 21,791  
Stock-based compensation expense     (497 )     (403 )     (1,317 )     (1,047 )
Depreciation and amortization     (228 )     (148 )     (997 )     (437 )
Gain on disposal of property and equipment                 28        
Non-GAAP R&D operating expenses   $ 5,631     $ 6,388     $ 15,732     $ 20,307  
                         
SG&A operating expenses   $ 26,595     $ 24,466     $ 84,524     $ 75,740  
Stock-based compensation expense     (4,441 )     (4,028 )     (16,398 )     (9,979 )
Amortization of acquired intangible assets                        
Depreciation and amortization     (781 )     (502 )     (3,289 )     (1,508 )
Loss on disposal of property and equipment           (4 )     (28 )     (27 )
Non-GAAP SG&A operating expenses   $ 21,373     $ 19,932     $ 64,809     $ 64,226  


STANDARD BIOTOOLS INC.
RECONCILIATION OF GAAP TO NON-GAAP FINANCIAL INFORMATION
Continuing Operations
(In thousands)
(Unaudited)

ITEMIZED RECONCILIATION OF GAAP NET LOSS TO ADJUSTED EBITDA
             
    Three Months Ended
September 30,
    Nine Months Ended
September 30,
 
    2025     2024     2025     2024  
Net loss   $ (31,684 )   $ (21,919 )   $ (72,727 )   $ (63,766 )
Income tax (benefit) expense     (1,216 )     118       (1,944 )     270  
Interest income     (2,140 )     (4,794 )     (7,517 )     (16,303 )
Interest expense     10       853       21       2,744  
Amortization of acquired intangible assets                       1,407  
Depreciation and amortization     1,599       967       5,693       2,961  
Bargain purchase gain                       (25,213 )
Restructuring and related charges     7,216       2,341       10,495       12,374  
Transaction and integration expenses     43       5,079       1,517       25,024  
Stock-based compensation expense     7,536       4,649       20,957       11,627  
Cost of sales adjustment                        
Loss on disposal of property and equipment           4       187       27  
Other non-operating (income) expense     2,092       (957 )     (3,438 )     865  
Adjusted EBITDA   $ (16,544 )   $ (13,658 )   $ (46,756 )   $ (47,982 )


STANDARD BIOTOOLS INC.
Condensed Results of Operations
Discontinued Operations
(In thousands)
(Unaudited)
             
    Three Months Ended
September 30,
    Nine Months Ended
September 30,
 
    2025     2024     2025     2024  
Revenue   $ 26,693     $ 22,884     $ 67,466     $ 61,484  
Cost of revenue     14,352       11,749       37,784       32,653  
Selling, general and administrative expenses     8,474       9,937       25,573       43,280  
Research and development     4,849       6,217       16,587       26,567  
Transaction and integration expenses     2,203       -       12,710       -  
Other (income) expense, net     (182 )     -       (3,736 )     31  
Total expenses   $ 29,696     $ 27,903     $ 88,918     $ 102,531  
Loss from discontinued operations   $ (3,003 )   $ (5,019 )   $ (21,452 )   $ (41,047 )


STANDARD BIOTOOLS INC.
RECONCILIATION OF GAAP TO NON-GAAP FINANCIAL INFORMATION
Discontinued Operations
(In thousands)
(Unaudited)

ITEMIZED RECONCILIATION OF GROSS PROFIT TO NON-GAAP GROSS PROFIT AND MARGIN PERCENTAGE
             
    Three Months Ended
September 30,
    Nine Months Ended
September 30,
 
    2025     2024     2025     2024  
Gross profit   $ 12,340     $ 11,134     $ 29,682     $ 28,831  
Amortization of acquired intangible assets           540       1,370       1,644  
Depreciation and amortization     (76 )     1,126       1,276       2,418  
Stock-based compensation expense     214       146       628       296  
Loss on disposal of property and equipment     7             65        
Cost of sales adjustment                       (1,812 )
Non-GAAP gross profit   $ 12,485     $ 12,946     $ 33,021     $ 31,377  
                         
Gross margin percentage     46.2 %     48.7 %     44.0 %     46.9 %
Amortization of acquired intangible assets           2.4 %     2.0 %     2.6 %
Depreciation and amortization     (0.2 )%     4.9 %     1.9 %     3.9 %
Stock-based compensation expense     0.8 %     0.6 %     0.9 %     0.5 %
Loss on disposal of property and equipment                 0.1 %      
Cost of sales adjustment                       (2.9 )%
Non-GAAP gross margin percentage     46.8 %     56.6 %     48.9 %     51.0 %


STANDARD BIOTOOLS INC.
RECONCILIATION OF GAAP TO NON-GAAP FINANCIAL INFORMATION
Discontinued Operations
(In thousands)
(Unaudited)

ITEMIZED RECONCILIATION OF GAAP TO NON-GAAP OPERATING EXPENSES
             
    Three Months Ended
September 30,
    Nine Months Ended
September 30,
 
    2025     2024     2025     2024  
Operating expenses   $ 15,526     $ 16,154     $ 54,974     $ 69,847  
Restructuring and related charges                 (104 )      
Transaction and integration expenses     (2,203 )           (12,710 )      
Stock-based compensation expense     (724 )     (1,126 )     (2,285 )     (12,339 )
Amortization of acquired intangible assets           (171 )     (345 )     (482 )
Depreciation and amortization           (1,053 )     (1,004 )     (3,995 )
Loss on disposal of property and equipment     (9 )     (26 )     (199 )     (388 )
Non-GAAP operating expenses   $ 12,590     $ 13,778     $ 38,327     $ 52,643  
                         
R&D operating expenses   $ 4,849     $ 6,217     $ 16,587     $ 26,567  
Stock-based compensation expense     (258 )     (321 )     (1,139 )     (3,433 )
Depreciation and amortization           (799 )     (843 )     (2,169 )
Loss on disposal of property and equipment     (9 )           (175 )      
Non-GAAP R&D operating expenses   $ 4,582     $ 5,097     $ 14,430     $ 20,965  
                         
SG&A operating expenses   $ 8,474     $ 9,937     $ 25,573     $ 43,280  
Stock-based compensation expense     (466 )     (805 )     (1,146 )     (8,906 )
Amortization of acquired intangible assets           (171 )     (345 )     (482 )
Depreciation and amortization           (254 )     (161 )     (1,826 )
Loss on disposal of property and equipment           (26 )     (24 )     (388 )
Non-GAAP SG&A operating expenses   $ 8,008     $ 8,681     $ 23,897     $ 31,678  


STANDARD BIOTOOLS INC.
RECONCILIATION OF GAAP TO NON-GAAP FINANCIAL INFORMATION
Discontinued Operations
(In thousands)
(Unaudited)

ITEMIZED RECONCILIATION OF GAAP NET LOSS TO ADJUSTED EBITDA
             
    Three Months Ended
September 30,
    Nine Months Ended
September 30,
 
    2025     2024     2025     2024  
Net loss   $ (3,003 )   $ (5,019 )   $ (21,452 )   $ (41,047 )
Income tax (benefit) expense     (1 )           (158 )     31  
Interest income                        
Interest expense                        
Amortization of acquired intangible assets           711       1,715       2,126  
Depreciation and amortization     (76 )     2,180       2,280       6,414  
Bargain purchase gain                        
Restructuring and related charges                 104        
Transaction and integration expenses     2,203             12,710        
Stock-based compensation expense     938       1,272       2,913       12,635  
Cost of sales adjustment                       (1,812 )
Loss on disposal of property and equipment     17       25       265       388  
Other non-operating (income) expense     (183 )           (3,683 )      
Adjusted EBITDA   $ (105 )   $ (832 )   $ (5,306 )   $ (21,266 )


STANDARD BIOTOOLS INC.
Condensed Combined Results of Operations
Continuing Operations and Discontinued Operations
(In thousands)
(Unaudited)
             
    Three Months Ended
September 30,
    Nine Months Ended
September 30,
 
    2025     2024     2025     2024  
Revenue   $ 46,245     $ 44,970     $ 129,002     $ 127,715  
Cost of revenue     24,420       21,709       68,159       65,358  
Selling, general and administrative expenses     35,069       34,403       110,097       119,020  
Research and development     11,205       13,156       34,605       48,358  
Transaction and integration expenses     2,246       5,079       14,227       25,024  
Restructuring     9,428       2,341       12,707       12,374  
Other (income) expense, net     (1,436 )     (4,780 )     (16,614 )     (37,606 )
Total expenses   $ 80,932     $ 71,908     $ 223,181     $ 232,528  
Net loss   $ (34,687 )   $ (26,938 )   $ (94,179 )   $ (104,813 )


STANDARD BIOTOOLS INC.
RECONCILIATION OF GAAP TO NON-GAAP FINANCIAL INFORMATION
Continuing Operations and Discontinued Operations
(In thousands)
(Unaudited)

ITEMIZED RECONCILIATION OF GROSS PROFIT TO NON-GAAP GROSS PROFIT AND MARGIN PERCENTAGE
             
    Three Months Ended
September 30,
    Nine Months Ended
September 30,
 
    2025     2024     2025     2024  
Gross profit   $ 21,824     $ 23,260     $ 60,843     $ 62,357  
Amortization of acquired intangible assets           540       1,370       3,051  
Depreciation and amortization     514       1,444       2,681       3,435  
Stock-based compensation expense     600       364       1,658       897  
Loss on disposal of property and equipment     7             252        
Cost of sales adjustment                       (1,812 )
Non-GAAP gross profit   $ 22,945     $ 25,608     $ 66,804     $ 67,928  
                         
Gross margin percentage     47.2 %     51.7 %     47.2 %     48.8 %
Amortization of acquired intangible assets           1.2 %     1.1 %     2.4 %
Depreciation and amortization     1.1 %     3.2 %     2.1 %     2.7 %
Stock-based compensation expense     1.3 %     0.8 %     1.3 %     0.7 %
Loss on disposal of property and equipment                 0.1 %      
Cost of sales adjustment                       (1.4 )%
Non-GAAP gross margin percentage     49.6 %     56.9 %     51.8 %     53.2 %


STANDARD BIOTOOLS INC.
RECONCILIATION OF GAAP TO NON-GAAP FINANCIAL INFORMATION
Continuing Operations and Discontinued Operations
(In thousands)
(Unaudited)

ITEMIZED RECONCILIATION OF GAAP TO NON-GAAP OPERATING EXPENSES
             
    Three Months Ended
September 30,
    Nine Months Ended
September 30,
 
    2025     2024     2025     2024  
Operating expenses   $ 57,948     $ 54,979     $ 171,740     $ 204,776  
Restructuring and related charges     (9,428 )     (2,341 )     (12,811 )     (12,374 )
Transaction and integration expenses     (2,246 )     (5,079 )     (14,227 )     (25,024 )
Stock-based compensation expense     (5,662 )     (5,557 )     (20,000 )     (23,365 )
Amortization of acquired intangible assets           (171 )     (345 )     (482 )
Depreciation and amortization     (1,009 )     (1,703 )     (5,290 )     (5,940 )
Loss on disposal of property and equipment     (9 )     (30 )     (199 )     (415 )
Non-GAAP operating expenses   $ 39,594     $ 40,098     $ 118,868     $ 137,176  
                         
R&D operating expenses   $ 11,205     $ 13,156     $ 34,605     $ 48,358  
Stock-based compensation expense     (755 )     (724 )     (2,456 )     (4,480 )
Depreciation and amortization     (228 )     (947 )     (1,840 )     (2,606 )
Loss on disposal of property and equipment     (9 )           (147 )      
Non-GAAP R&D operating expenses   $ 10,213     $ 11,485     $ 30,162     $ 41,272  
                         
SG&A operating expenses   $ 35,069     $ 34,403     $ 110,097     $ 119,020  
Stock-based compensation expense     (4,907 )     (4,833 )     (17,544 )     (18,885 )
Amortization of acquired intangible assets           (171 )     (345 )     (482 )
Depreciation and amortization     (781 )     (756 )     (3,450 )     (3,334 )
Loss on disposal of property and equipment           (30 )     (52 )     (415 )
Non-GAAP SG&A operating expenses   $ 29,381     $ 28,613     $ 88,706     $ 95,904  


STANDARD BIOTOOLS INC.
RECONCILIATION OF GAAP TO NON-GAAP FINANCIAL INFORMATION
Continuing Operations and Discontinued Operations
(In thousands)
(Unaudited)

ITEMIZED RECONCILIATION OF GAAP NET LOSS TO ADJUSTED EBITDA
             
    Three Months Ended
September 30,
    Nine Months Ended
September 30,
 
    2025     2024     2025     2024  
Net loss   $ (34,687 )   $ (26,938 )   $ (94,179 )   $ (104,813 )
Income tax (benefit) expense     (1,217 )     118       (2,102 )     301  
Interest income     (2,140 )     (4,794 )     (7,517 )     (16,303 )
Interest expense     10       853       21       2,744  
Amortization of acquired intangible assets           711       1,715       3,533  
Depreciation and amortization     1,523       3,147       7,971       9,375  
Bargain purchase gain                       (25,213 )
Restructuring and related charges     7,216       2,341       10,599       12,374  
Transaction and integration expenses     2,246       5,079       14,227       25,024  
Stock-based compensation expense     8,474       5,921       23,870       24,262  
Cost of sales adjustment                       (1,812 )
Loss on disposal of property and equipment     17       29       452       415  
Other non-operating (income) expense     1,909       (957 )     (7,121 )     865  
Adjusted EBITDA   $ (16,649 )   $ (14,490 )   $ (52,064 )   $ (69,248 )

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